PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang07g07170.1
Common NameLR48_Vigan442s010900
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family ERF
Protein Properties Length: 179aa    MW: 19646.8 Da    PI: 5.3334
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang07g07170.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.55.8e-171766255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    ++kGVr++k +g+Wv+eIr+p   g +  r +lg++ t+e Aa a++ a  +l+ 
  Vang07g07170.1 17 KFKGVRRRK-WGKWVSEIRVP---G-TqERLWLGTYVTPEAAAVAHDVAVYCLRR 66
                    89****998.**********8...3.35***********************9986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.96E-161770IPR016177DNA-binding domain
PfamPF008471.3E-91765IPR001471AP2/ERF domain
CDDcd000187.87E-151778No hitNo description
PROSITE profilePS5103220.6661776IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.0E-241777IPR001471AP2/ERF domain
SMARTSM003801.6E-241782IPR001471AP2/ERF domain
PRINTSPR003673.9E-81829IPR001471AP2/ERF domain
PRINTSPR003673.9E-84056IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    Send to blast
MSKSSALHAI CPSRDHKFKG VRRRKWGKWV SEIRVPGTQE RLWLGTYVTP EAAAVAHDVA  60
VYCLRRPSSL DKLNLPDTLS SYSGQLRDMS PRSVQKVASD VGMDVDARNI AAGGSSSGVA  120
QSQESEKKME ERNGIVGADD SDEFWWNGFE GYDTATWKGS GEDCADRDAL NISIEDYL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11824KGVRRRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150430.0AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014519551.11e-115PREDICTED: ethylene-responsive transcription factor ERF020-like
SwissprotQ9C9I82e-39ERF20_ARATH; Ethylene-responsive transcription factor ERF020
TrEMBLA0A0L9TAU61e-130A0A0L9TAU6_PHAAN; Uncharacterized protein
STRINGGLYMA11G01700.11e-70(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54893054
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71520.19e-39ERF family protein
Publications ? help Back to Top
  1. Yang K, et al.
    Genome sequencing of adzuki bean (Vigna angularis) provides insight into high starch and low fat accumulation and domestication.
    Proc. Natl. Acad. Sci. U.S.A., 2015. 112(43): p. 13213-8
    [PMID:26460024]